The Origin is the first issue of the series.
The issue starts off with Samus wandering around Brinstar, when she comes across a zoomer. She shoots it after overreacting, and encounters Ridley, who somehow causes her to faint. Ridley takes Samus to Mother Brain, who apparently only speaks in leet. Ridley decides to show off his capture to Kraid, but Kraid only wants to eat Samus. As Ridley yells at Kraid, Samus awakens and slips away. The issue concludes with a voice telling Samus to stop where she is.
- This is one of only a select few issues with four panels, along with The End!, Issue 100, and The Final Showdown.
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